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ARTIGOS CIENTÍFICOS

Confira a lista dos artigos publicados em periódicos indexados pelos pesquisadores do Laboratório de Biologia Computacional e Sistemas do Instituto Oswaldo Cruz (IOC/Fiocruz):

2014

Indexado (fator de impacto < 1 ou sem FI)

Wagner G, Fonseca RJM, Tschoeke DA, Daniel R Loureiro, Kary ACS Ocaña, Antonio CB Ribeiro, Vanessa E Emmel, Probst CM, Pitaluga NA, Edmundo C Grisard, Maria C Cavalcanti, Maria LM Campos, Marta Mattoso, Davila AMR 2014. STINGRAY: system for integrated genomic resources and analysis. BMC Res Notes 7: - .

Miguel Ponce de Leon, Miranda AB, Fernando Alvarez-Valin, Nicolas Carels 2014. The Purine Bias of Coding Sequences is Determined by Physicochemical Constraints on Proteins. Bioinform Biol Insights 8: 93-108.

Indexado (fator de impacto >=1 e < 2,71)

Cuadrat RR, da Serra Cruz Sérgio Manue, Tschoeke DA, Silva Edno, Tosta Frederico, Jucá Henrique, Fonseca RJM, Campos Maria Luiza M, Mattoso Marta, Davila AMR 2014. An Orthology-Based Analysis of Pathogenic Protozoa Impacting Global Health: An Improved Comparative Genomics Approach with Prokaryotes and Model Eukaryote Orthologs. OMICS 18: 524-538.

Tschoeke DA, Nunes GL, Fonseca RJM, Lima-de-Oliveira JA, Silva PRV, Gomes MR, Pereira LM, Loureiro DR, Patricia H Stoco, Herbert Leonel de Matos Guedes, Miranda AB, Jeronimo Ruiz, André Pitaluga, Silva Jr FPS, Christian M Probst, Nicholas J Dickens, Jeremy C Mottram, Edmundo C Grisard, Davila AMR 2014. The Comparative Genomics and Phylogenomics of Leishmania amazonensis Parasite. Evol Bioinform 10: 131-153.

Indexado (fator de impacto >=4,35 e < 7,51)

Monteiro FA, Lellis RS, Martins-Jr AJ, Andrea Gloria-Soria, Julia E. Brown, Jeffrey R. Powell 2014. Genetic Diversity of Brazilian Aedes aegypti: Patterns following an Eradication Program. PLoS Neglect Trop D 8: - .

2013

Indexado (fator de impacto >=2,71 e < 4,35)
TORRES, Davi Coe, Alves MR, ROMERO, GUSTAVO A.S., Davila AMR, Cupolillo E 2013. Assessment of drug resistance related genes as candidate markers for treatment outcome prediction of cutaneous leishmaniasis in Brazil. Acta Trop 126: 132-141.

2012

Indexado (fator de impacto >=2,71 e < 4,35)
Azevedo RV, Dias DB, Bretãs JA, Mazzoni CJ, Souza NA, Albano RM, Wagner G, Davila AM, Peixoto AA 2012. The transcriptome of Lutzomyia longipalpis (Diptera: Psychodidae) male reproductive organs. PLoS One 7: - .

Indexado (fator de impacto >=4,35 e < 7,51)
da Mota FF, Marinho LP, Moreira CJ, Lima MM, Mello CB, Garcia ES, Carels N, Azambuja P 2012. Cultivation-independent methods reveal differences among bacterial gut microbiota in triatomine vectors of Chagas disease. PLoS Negl Trop Dis 6: - .

2011

doi

Cury JC, Araujo FV, Coelho-Souza SA, Peixoto RS, Oliveira JA, Santos HF, Dávila AM, Rosado AS. Microbial diversity of a Brazilian coastal region influenced by an upwelling system and anthropogenic activity. PLoS One. 2011 Jan 27;6(1):e16553.

doi

Macedo RCL, Rosado AS, Mota FF, Cavalcante MAS, Eulalio KD, Filho AD, Martins LMS, Lazera MS, Wanke B. Molecular identification of Coccidioides spp. in soil samples from Brazil BMC Microbiology 2011, 11:108.

2010

Aniszewski E, Peixoto RS, Mota FF, Leite SG, Rosado AS 2010. Bioemulsifier production by Microbacterium sp. strains isolated from mangrove and their application to remove cadmiun and zinc from hazardous industrial residue. Braz J Microbiol 41: 235-245.

Da Cruz SM, Batista V, Silva E, Tosta F, Vilela C, Cuadrat R, Tschoeke  D, Davila A, Campos M, Mattoso M 2010. Detecting distant homologies on protozoans metabolic pathways using scientific workflows. Int J Data Min Bioinform 4: 256-280.

Teixeira RL, Silva FP Jr, Silveira AR, Cabello PH, Mendonça-Lima L, Rabahi MF, Kritski AL, Mello FC, Suffys PN, de Miranda AB, Santos AR 2010. Sequence analysis of NAT2 gene in Brazilians: Identification of undescribed single nucleotide polymorphisms and molecular modeling of the N-acetyltransferase 2 protein structure. MUTAT RES-FUND MOL M 683: 43-49.

Capriles PV, Guimaraes AC, Otto TD, Miranda AB, Dardenne LE, Degrave WM 2010. Structural modelling and comparative analysis of homologous, analogous and specific proteins from Trypanosoma cruzi versus Homo sapiens: putative drug targets for Chagas disease treatment. BMC Genomics 11.

Grisard EC, Stoco PH, Wagner G, Sincero TC, Rotava G, Rodrigues JB, Snoeijer CQ, Koerich LB, Sperandio MM, Bayer-Santos E, Fragoso SP, Goldenberg S, Triana O, Vallejo GA, Tylerf KM, Dávila AM, Steindel M 2010. Transcriptomic analyses of the avirulent protozoan parasite Trypanosoma rangeli. Mol Biochem Parasitol 174: 18-25.

Otto TD, Catanho M, Tristao C, Bezerra M, Fernandes RM, Elias GS, Scaglia AC, Bovermann B, Berstis V, Lifschitz S, Miranda AB, Degrave W 2010. ProteinWorldDB: querying radical pairwise alignments among protein sets from complete genomes. Bioinformatics 26: 705-707.

2009

doi

Almeida CR< Stoco PH, Wagner G, Sincero TC, Rotava G, Bayer-Santos E, Rodrigues JB, Sperandio MM, Maia AA, Oiopi EP, Zaha A, Ferreira HB, Tyler KM, Dávila Am, Grisard EC, Dias-Neto,  ETranscriptome analysis of Taenia solium cysticerci using open reading frame ESTs (ORESTES), 2009, Parasite &Vectors (online), Volume 31, Issue 2(1), Page 35.

doi

Sangenito LS, Ennes-Vidal V, Marinho FA, da Mota FF, santos AL, D´Avila-Levy CM, Branquinha MH, Arrested growth of Trypanosoma cruzi by the calpain inhibitor MDL28170 and detection of calpain homologues in epimastigote forms, 2009, Parasitology, Volume 136, Issue 4, Pages 433-41.

Pitaluga AN, Beteille V, Lobo AR, Ortigão-Farias JR, Davila AMR, Souza AA, Ramalho-Ortigão JM, Traub-Cseko YM, EST sequencing of blood-fed and Leishmania-infected midgut of Lutzomyia longipalpis, the principal visceral leishmaniasis vector in the Americas, 2009, Molecular Genetics and Genomics, volume 282, Issue 3, pages 307-17.

Observação: A criação do Laboratório de Biologia Computacional e Sistemas do IOC foi ratificada pelo Conselho Deliberativo do Instituto em 2009, após Processo de Recredenciamento dos Laboratórios do IOC. Leia mais sobre o Processo de Recredenciamento dos Laboratórios do Instituto.